../../tmp/servers/virsirnadb/33269105
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1419 | 1 | aatttccgtactagatgtccc | 21 | |
| U18979.1 | LCU18979 La Crosse virus isolate LAC30928-31 M segment polyprotein gen | 1627 | ..................... | 1647 | 100 |
| U18979.1 | LCU18979 La Crosse virus isolate LAC30928-31 M segment polyprotein gen | 3038 | ___________.......... | 3029 | 47 |
| U18980.1 | LCU18980 La Crosse virus isolate LAC22988-89 M segment polyprotein gen | 1627 | ..................... | 1647 | 100 |
| U18980.1 | LCU18980 La Crosse virus isolate LAC22988-89 M segment polyprotein gen | 3038 | ___________.......... | 3029 | 47 |
| U70205.1 | LCU70205 La Crosse virus polyprotein gene, complete cds | 1627 | ..................... | 1647 | 100 |
| U70205.1 | LCU70205 La Crosse virus polyprotein gene, complete cds | 3073 | ______.t..........___ | 3084 | 52 |
| U70205.1 | LCU70205 La Crosse virus polyprotein gene, complete cds | 3038 | ___________.......... | 3029 | 47 |
| U70206.1 | LCU70206 La Crosse virus polyprotein gene, complete cds | 1627 | ..................... | 1647 | 100 |
| U70206.1 | LCU70206 La Crosse virus polyprotein gene, complete cds | 3038 | ___________.......... | 3029 | 47 |
| DQ196119.1 | La Crosse virus strain 77 segment middle, complete sequence | 1627 | ..................... | 1647 | 100 |
| DQ196119.1 | La Crosse virus strain 77 segment middle, complete sequence | 3038 | ___________.......... | 3029 | 47 |
| EF485031.1 | La Crosse virus strain LACV/human/1960 segment medium, complete seque | 1627 | ..................... | 1647 | 100 |
| EF485031.1 | La Crosse virus strain LACV/human/1960 segment medium, complete seque | 3038 | ___________.......... | 3029 | 47 |
| EF485034.1 | La Crosse virus strain LACV/human/1978 segment medium, complete seque | 1627 | ..................... | 1647 | 100 |
| EF485034.1 | La Crosse virus strain LACV/human/1978 segment medium, complete seque | 3038 | ___________.......... | 3029 | 47 |
| M87664.1 | BLCG2NSM Bunyavirus La Crosse G2/Nsm/G1 gene, open reading frame | 1604 | ................a.... | 1624 | 95 |
| M87664.1 | BLCG2NSM Bunyavirus La Crosse G2/Nsm/G1 gene, open reading frame | 3015 | ___________.......... | 3006 | 47 |
| D10370.1 | BLCMRP La Crosse virus M RNA for polyprotein, complete cds | 1627 | ................a.... | 1647 | 95 |
| D10370.1 | BLCMRP La Crosse virus M RNA for polyprotein, complete cds | 3037 | ____________......... | 3029 | 42 |
| U70207.1 | LCU70207 La Crosse virus polyprotein gene, complete cds | 1627 | ................a.... | 1647 | 95 |
| U70207.1 | LCU70207 La Crosse virus polyprotein gene, complete cds | 3073 | ______.t..........___ | 3084 | 52 |
| U70207.1 | LCU70207 La Crosse virus polyprotein gene, complete cds | 3038 | ___________.......... | 3029 | 47 |
| U70208.1 | LCU70208 La Crosse virus polyprotein gene, complete cds | 1627 | ................a.... | 1647 | 95 |
| U70208.1 | LCU70208 La Crosse virus polyprotein gene, complete cds | 3073 | ______.t..........___ | 3084 | 52 |
| U70208.1 | LCU70208 La Crosse virus polyprotein gene, complete cds | 3038 | ___________.......... | 3029 | 47 |
| EF485037.1 | La Crosse virus strain LACV/mosquito/1978 segment medium, complete se | 1627 | .........g......a.... | 1647 | 90 |
| EF485037.1 | La Crosse virus strain LACV/mosquito/1978 segment medium, complete se | 3038 | ___________.......... | 3029 | 47 |
| AF123483.1 | California encephalitis virus polyprotein mRNA, complete cds | 1628 | _..c..ta..........t.. | 1647 | 76 |
| EU616903.1 | Chatanga virus strain LEIV-17756 segment L, complete sequence | 6656 | _..a..........g._____ | 6642 | 61 |
| EU616903.1 | Chatanga virus strain LEIV-17756 segment L, complete sequence | 5381 | ________.........____ | 5389 | 42 |
| AF123484.1 | Lumbo virus polyprotein mRNA, complete cds | 2025 | __________........... | 2015 | 52 |
| AF123484.1 | Lumbo virus polyprotein mRNA, complete cds | 3072 | ________..........___ | 3081 | 47 |
| AF123484.1 | Lumbo virus polyprotein mRNA, complete cds | 3513 | ___........._________ | 3505 | 42 |
| DQ196118.1 | La Crosse virus strain 77 segment large, complete sequence | 4067 | _______..........ct.. | 4080 | 57 |
| AF123485.1 | Tahyna virus polyprotein mRNA, complete cds | 2026 | _________.........t.. | 2015 | 52 |
| AF229129.1 | Tahyna virus middle segment RNA ORF (M-RNA) mRNA, complete cds | 2026 | _________.........t.. | 2015 | 52 |
| EU621834.1 | Chatanga virus strain LEIV-17756 segment M polyprotein gene, complete | 3062 | ________..........___ | 3071 | 47 |
| AF123486.1 | San Angelo virus polyprotein mRNA, complete cds | 2820 | _________.a........._ | 2830 | 47 |
| AF123491.1 | Trivittatus virus polyprotein mRNA, complete cds | 1598 | _.........g._________ | 1588 | 47 |
| EU789573.1 | Inkoo virus segment large strain KN3641, complete sequence | 1472 | ________.........____ | 1480 | 42 |